GEO Data Resource of this dataset

This dataset can be reached at Gene Expression Omnibuis (GEO) under the following number: GSE47189

Gene expression matrix data and annotation file for Illumina microarrays

Gene expression matrix of log2 transformed unnormalized data
matrix_unnormalized.txt.zip

Gene expression matrix of log2 transformed quantile normalized and batch corrected data
matrix_normalized.txt.zip

Annotation file of HumanHT12v3 array type for matrix data
annotation_of_HumanHT12v3_arrays.csv.zip

Differentially expressed genes - ANOVA tables comparing each individual conditions with 28 other conditions

ANOVA model comparing baseline macrophages with other 28 in vitro conditions
ANOVA-baseline_vs._other_28_conditions.txt.zip

ANOVA model comparing IFNß-stimulated macrophages with other 28 in vitro conditions
ANOVA-IFNb_vs._other_28_conditions.txt.zip

ANOVA model comparing HDL-stimulated macrophages with other 28 in vitro conditions
ANOVA-HDL_vs._other_28_conditions.txt.zip

ANOVA model comparing IL10-stimulated macrophages with other 28 in vitro conditions
ANOVA-IL10_vs._other_28_conditions.txt.zip

ANOVA model comparing GC-stimulated macrophages with other 28 in vitro conditions
ANOVA-GC_vs._other_28_conditions.txt.zip

ANOVA model comparing IL4-stimulated macrophages with other 28 in vitro conditions
ANOVA-IL4_vs._other_28_conditions.txt.zip

ANOVA model comparing IL13-stimulated macrophages with other 28 in vitro conditions
ANOVA-IL13_vs._other_28_conditions.txt.zip

ANOVA model comparing IL4+upLPS-stimulated macrophages with other 28 in vitro conditions
ANOVA-IL4_upLPS_vs._other_28_conditions.txt.zip

ANOVA model comparing upLPS+IC-stimulated macrophages with other 28 in vitro conditions
ANOVA-upLPS_IC_vs._other_28_conditions.txt.zip

ANOVA model comparing upLPS-stimulated macrophages with other 28 in vitro conditions
ANOVA-upLPS_vs._other_28_conditions.txt.zip

ANOVA model comparing P3C+PGE2 -stimulated macrophages with other 28 in vitro conditions
ANOVA-P3C_PGE2_vs._other_28_conditions.txt.zip

ANOVA model comparing P3C-stimulated macrophages with other 28 in vitro conditions
ANOVA-P3C_vs._other_28_conditions.txt.zip

ANOVA model comparing PGE2-stimulated macrophages with other 28 in vitro conditions
ANOVA-PGE2_vs._other_28_conditions.txt.zip

ANOVA model comparing LA-stimulated macrophages with other 28 in vitro conditions
ANOVA-LA_vs._other_28_conditions.txt.zip

ANOVA model comparing OA-stimulated macrophages with other 28 in vitro conditions
ANOVA-OA_vs._other_28_conditions.txt.zip

ANOVA model comparing LiA-stimulated macrophages with other 28 in vitro conditions
ANOVA-LiA_vs._other_28_conditions.txt.zip

ANOVA model comparing SA-stimulated macrophages with other 28 in vitro conditions
ANOVA-SA_vs._other_28_conditions.txt.zip

ANOVA model comparing PA-stimulated macrophages with other 28 in vitro conditions
ANOVA-PA_vs._other_28_conditions.txt.zip

ANOVA model comparing IFNg-stimulated macrophages with other 28 in vitro conditions
ANOVA-IFNg_vs._other_28_conditions.txt.zip

ANOVA model comparing TNF-stimulated macrophages with other 28 in vitro conditions
ANOVA-TNF_vs._other_28_conditions.txt.zip

ANOVA model comparing IFNg+TNF-stimulated macrophages with other 28 in vitro conditions
ANOVA-IFNg_TNF_vs._other_28_conditions.txt.zip

ANOVA model comparing sLPS-stimulated macrophages with other 28 in vitro conditions
ANOVA-sLPS_vs._other_28_conditions.txt.zip

ANOVA model comparing sLPS+IFNg-stimulated macrophages with other 28 in vitro conditions
ANOVA-sLPS_IFNg_vs._other_28_conditions.txt.zip

ANOVA model comparing sLPS+IC-stimulated macrophages with other 28 in vitro conditions
ANOVA-sLPS_IC_vs._other_28_conditions.txt.zip

ANOVA model comparing TNF+PGE2-stimulated macrophages with other 28 in vitro conditions
ANOVA-TNF_PGE2_vs._other_28_conditions.txt.zip

ANOVA model comparing TNF+P3C-stimulated macrophages with other 28 in vitro conditions
ANOVA-TNF_P3C_vs._other_28_conditions.txt.zip

ANOVA model comparing TNF+ P3C+PGE2 (TPP)-stimulated macrophages with other 28 in vitro conditions
ANOVA-TPP_vs._other_28_conditions.txt.zip

ANOVA model comparing TPP+IFNß-stimulated macrophages with other 28 in vitro conditions
ANOVA-TPP_IFNb_vs._other_28_conditions.txt.zip

ANOVA model comparing TPP+IFNß+IFNg-stimulated macrophages with other 28 in vitro conditions
ANOVA-TPP_IFNb_IFNg_vs._other_28_conditions.txt.zip